BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003A02SP1|AL425049
(964 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig832 521 e-147
3x_Contig458 256 4e-68
>3x_Contig832
Length = 3863
Score = 521 bits (262), Expect = e-147
Identities = 262/262 (100%)
Strand = Plus / Minus
Query: 1 acagccaccaatagcaatcaattgaatatgagcagatttaagacctttctttaaattatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 acagccaccaatagcaatcaattgaatatgagcagatttaagacctttctttaaattatg 212
Query: 61 gtctccgctttgaggtttatttggtagagaaccatttttttctgagtcgttcgagtaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gtctccgctttgaggtttatttggtagagaaccatttttttctgagtcgttcgagtaaga 152
Query: 121 tgttaaatctaactcataaacttgacctgtttgtttatccacaacactggtctcgccagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 tgttaaatctaactcataaacttgacctgtttgtttatccacaacactggtctcgccagc 92
Query: 181 atcttttaggtcttgtagattcgacataattattgtagcttcgtattgttttcacgctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 atcttttaggtcttgtagattcgacataattattgtagcttcgtattgttttcacgctgt 32
Query: 241 gatgagcttcaattctgctata 262
||||||||||||||||||||||
Sbjct: 31 gatgagcttcaattctgctata 10
>3x_Contig458
Length = 2388
Score = 256 bits (129), Expect = 4e-68
Identities = 136/137 (99%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 816 aaggaagaacggctaatcggtgtttactcctcatctcatatctcgctcgcaaacaggtaa 875
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2380 aaggaagaacggctaatcggtgtt-actcctcatctcatatctcgctcgcaaacaggtaa 2322
Query: 876 aatctcctttaatcaggatgagtagctgaatatgctccagaaatactaggaacaattaaa 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2321 aatctcctttaatcaggatgagtagctgaatatgctccagaaatactaggaacaattaaa 2262
Query: 936 ctcatctcatcagaaaa 952
|||||||||||||||||
Sbjct: 2261 ctcatctcatcagaaaa 2245
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8095
Number of Sequences: 1807
Number of extensions: 8095
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 2
length of query: 964
length of database: 10,358,551
effective HSP length: 16
effective length of query: 948
effective length of database: 10,329,639
effective search space: 9792497772
effective search space used: 9792497772
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)